220 research outputs found
On Exceptional Times for generalized Fleming-Viot Processes with Mutations
If is a standard Fleming-Viot process with constant mutation rate
(in the infinitely many sites model) then it is well known that for each
the measure is purely atomic with infinitely many atoms. However,
Schmuland proved that there is a critical value for the mutation rate under
which almost surely there are exceptional times at which is a
finite sum of weighted Dirac masses. In the present work we discuss the
existence of such exceptional times for the generalized Fleming-Viot processes.
In the case of Beta-Fleming-Viot processes with index we
show that - irrespectively of the mutation rate and - the number of
atoms is almost surely always infinite. The proof combines a Pitman-Yor type
representation with a disintegration formula, Lamperti's transformation for
self-similar processes and covering results for Poisson point processes
Exceptional Sequences of Line Bundles and Spherical Twists - a Toric Example
Exceptional sequences of line bundles on a smooth projective toric surface
are automatically full when they can be constructed via augmentation. By using
spherical twists, we give examples that there are also exceptional sequences
which can not be constructed this way but are nevertheless full.Comment: 12 pages, 3 figure
Quenched large deviation principle for words in a letter sequence
When we cut an i.i.d. sequence of letters into words according to an
independent renewal process, we obtain an i.i.d. sequence of words. In the
\emph{annealed} large deviation principle (LDP) for the empirical process of
words, the rate function is the specific relative entropy of the observed law
of words w.r.t. the reference law of words. In the present paper we consider
the \emph{quenched} LDP, i.e., we condition on a typical letter sequence. We
focus on the case where the renewal process has an \emph{algebraic} tail. The
rate function turns out to be a sum of two terms, one being the annealed rate
function, the other being proportional to the specific relative entropy of the
observed law of letters w.r.t. the reference law of letters, with the former
being obtained by concatenating the words and randomising the location of the
origin. The proportionality constant equals the tail exponent of the renewal
process. Earlier work by Birkner considered the case where the renewal process
has an exponential tail, in which case the rate function turns out to be the
first term on the set where the second term vanishes and to be infinite
elsewhere. In a companion paper the annealed and the quenched LDP are applied
to the collision local time of transient random walks, and the existence of an
intermediate phase for a class of interacting stochastic systems is
established.Comment: 41 pages, 2 figures. Acronym LDP spelled out in title, main result
strengthened to cover more general "letter" spaces, application to collision
local times removed (this part will become a separate manuscript
Hydrophobic gating of mechanosensitive channel of large conductance evidenced by single-subunit resolution
Mechanosensitive (MS) ion channels are membrane proteins that detect and respond to membrane tension in all branches of life. In bacteria, MS channels prevent cells from lysing upon sudden hypoosmotic shock by opening and releasing solutes and water. Despite the importance of MS channels and ongoing efforts to explain their functioning, the molecular mechanism of MS channel gating remains elusive and controversial. Here we report a method that allows single-subunit resolution for manipulating and monitoring “mechanosensitive channel of large conductance” from Escherichia coli. We gradually changed the hydrophobicity of the pore constriction in this homopentameric protein by modifying a critical pore residue one subunit at a time. Our experimental results suggest that both channel opening and closing are initiated by the transmembrane 1 helix of a single subunit and that the participation of each of the five identical subunits in the structural transitions between the closed and open states is asymmetrical. Such a minimal change in the pore environment seems ideal for a fast and energy-efficient response to changes in the membrane tension.
The 1+1-dimensional Kardar-Parisi-Zhang equation and its universality class
We explain the exact solution of the 1+1 dimensional Kardar-Parisi-Zhang
equation with sharp wedge initial conditions. Thereby it is confirmed that the
continuum model belongs to the KPZ universality class, not only as regards to
scaling exponents but also as regards to the full probability distribution of
the height in the long time limit.Comment: Proceedings StatPhys 2
Terahertz radiation driven chiral edge currents in graphene
We observe photocurrents induced in single layer graphene samples by
illumination of the graphene edges with circularly polarized terahertz
radiation at normal incidence. The photocurrent flows along the sample edges
and forms a vortex. Its winding direction reverses by switching the light
helicity from left- to right-handed. We demonstrate that the photocurrent stems
from the sample edges, which reduce the spatial symmetry and result in an
asymmetric scattering of carriers driven by the radiation electric field. The
developed theory is in a good agreement with the experiment. We show that the
edge photocurrents can be applied for determination of the conductivity type
and the momentum scattering time of the charge carriers in the graphene edge
vicinity.Comment: 4 pages, 4 figure, additional Supplemental Material (3 pages, 1
figure
Vibrational Spectra of a Mechanosensitive Channel
We report the simulated vibrational spectra of a mechanosensitive membrane channel in different gating states. Our results show that while linear absorption is insensitive to structural differences, linear dichroism and sum-frequency generation spectroscopies are sensitive to the orientation of the transmembrane helices, which is changing during the opening process. Linear dichroism cannot distinguish an intermediate structure from the closed structure, but sum-frequency generation can. In addition, we find that two-dimensional infrared spectroscopy can be used to distinguish all three investigated gating states of the mechanosensitive membrane channel.
Ketamine Dysregulates the Amplitude and Connectivity of High-Frequency Oscillations in Cortical-Subcortical Networks in Humans: Evidence From Resting-State Magnetoencephalography-Recordings
Hypofunctioning of the N-methyl-D-aspartate (NMDA)-receptor (NMDA-R) has been prominently implicated in the pathophysiology of schizophrenia (ScZ). The current study tested the effects of ketamine, a dissociative anesthetic and NMDA-R antagonist, on resting-state activity recorded with magnetoencephalography (MEG) in healthy volunteers. In a single-blind cross-over design, each participant (n = 12) received, on two different sessions, a subanesthetic dose of S-ketamine (0.006 mg/Kg) and saline injection. MEG-data were analyzed at sensorand source- level in the beta (13-30 Hz) and gamma (30-90 Hz) frequency ranges. In addition, connectivity analysis at source-level was performed using transfer entropy (TE). Ketamine increased gamma-power while beta-band activity was decreased. Specifically, elevated 30-90 Hz activity was pronounced in subcortical (thalamus and hippocampus) and cortical (frontal and temporal cortex) regions, whilst reductions in beta-band power were localized to the precuneus, cerebellum, anterior cingulate, temporal and visual cortex. TE analysis demonstrated increased information transfer in a thalamo-cortical network after ketamine administration. The findings are consistent with the pronounced dysregulation of highfrequency oscillations following the inhibition of NMDA-R in animal models of ScZ as well as with evidence from EEG-data in ScZ-patients and increased functional connectivity during
early illness stages. Moreover, our data highlight the potential contribution of thalamo-cortical connectivity patterns towards ketamine-induced neuronal dysregulation, which may be relevant for the understanding of schizophrenia as a disorder of disinhibition of neural circuits
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